Histopathology data for Slc11a1

Score Definitions

Severity Score:

  • 0 = Normal,
  • 1 = Mild (observation barely perceptible and not believed to have clinical significance),
  • 2 = Moderate (observation visible but involves minor proportion of tissue and clinical consequences of observation are most likely subclinical),
  • 3 = Marked (observation clearly visible involves a significant proportion of tissue and is likely to have some clinical manifestations generally expected to be minor),
  • 4 = Severe (observation clearly visible involves a major proportion of tissue and clinical manifestations are likely associated with significant tissue dysfunction or damage)

Significance Score:

  • 0 = Not significant: Interpreted by the histopathologist to be a finding attributable to background strain (e.g. low-incidence hydrocephalus, microphthalmia) or incidental to mutant phenotype (e.g. hair-induced glossitis, focal hyperplasia, mild mononuclear cell infiltrate).
  • 1 = Significant: Interpreted by the histopathologist as a finding not attributable to background strain and not incidental to mutant phenotype.


Zyg Sex Mouse Tissue MPATH Process Term Severity Score Significance Score MPATH Diagnostic PATO Descriptor Free Text Images
HOM F #3 Sternum [MA:0001331]
HOM M #4 Lung [MA:0000415]
HOM F #2 Femur [MA:0001359]
HOM M #1 Thymus [MA:0000142]
HOM M #4 Tongue [MA:0000347]
HOM M #1 Tibia [MA:0001361]
HOM M #1 Brown adipose tissue [MA:0000057]
HOM M #4 Brain [MA:0000168]
HOM M #1 Liver [MA:0000358]
HOM M #4 Heart [MA:0000072]
HOM M #4 Ear [MA:0000236]
HOM F #3 Adrenal gland [MA:0000116]
HOM F #3 Spleen [MA:0000141]
HOM M #1 Small intestine [MA:0000337]
HOM M #4 Skin [MA:0000151]
HOM F #3 Stomach [MA:0000353]
HOM M #4 Stomach [MA:0000353]
HOM F #3 Urinary bladder [MA:0000380]
HOM F #3 Large intestine [MA:0000333]
HOM M #4 Skeletal muscle [MA:0003148]
HOM F #2 Urinary bladder [MA:0000380]
HOM F #2 Small intestine [MA:0000337]
HOM M #4 Kidney [MA:0000368]
HOM M #4 Large intestine [MA:0000333]
HOM F #2 Brown adipose tissue [MA:0000057]
HOM F #3 Uterus [MA:0000389]
HOM F #3 Spinal cord [MA:0000216]
HOM F #3 Skin [MA:0000151]
HOM F #3 Skeletal muscle [MA:0003148]
HOM F #2 Sternum [MA:0001331]
HOM F #3 Femur [MA:0001359]
HOM F #2 Ovary [MA:0000384]
HOM F #2 Mammary gland [MA:0000145]
HOM F #3 Esophagus [MA:0000352]
HOM F #2 Thymus [MA:0000142]
HOM F #3 Ovary [MA:0000384]
HOM F #2 Spinal cord [MA:0000216]
HOM F #3 Bone marrow [MA:0000134]
HOM M #4 Spleen [MA:0000141]
HOM M #1 Epididymis [MA:0000397]
HOM M #4 Thyroid
HOM M #4 Gall bladder [MA:0000356]
HOM M #1 Tooth [MA:0000348]
HOM F #2 Pancreas [MA:0000120]
HOM M #4 Femur [MA:0001359]
HOM M #1 Knee joint [MA:0000471]
HOM M #4 Spinal cord [MA:0000216]
HOM M #1 Kidney [MA:0000368]
HOM M #1 Sternum [MA:0001331]
HOM F #3 Small intestine [MA:0000337]
HOM F #2 Trigeminal V ganglion [MA:0001080]
HOM M #4 Epididymis [MA:0000397]
HOM F #2 Brain [MA:0000168]
HOM M #4 Trachea [MA:0000441]
HOM M #4 Eye [MA:0000261]
HOM F #3 Brain [MA:0000168]
HOM M #4 Nasal cavity [MA:0000284]
HOM M #1 Spleen [MA:0000141]
HOM F #2 Adrenal gland [MA:0000116]
HOM M #1 Spinal cord [MA:0000216]
HOM F #3 Tongue [MA:0000347]
HOM M #4 Sternum [MA:0001331]
HOM M #1 Femur [MA:0001359]
HOM M #4 Knee joint [MA:0000471]
HOM M #1 Pancreas [MA:0000120]
HOM M #1 Eye [MA:0000261]
HOM M #1 Trigeminal V ganglion [MA:0001080]
HOM M #4 Thymus [MA:0000142]
HOM F #2 Tongue [MA:0000347]
HOM F #2 Spleen [MA:0000141]
HOM F #3 Lymph node [MA:0000139]
HOM F #3 Tibia [MA:0001361]
HOM M #1 Thyroid
HOM F #2 Tibia [MA:0001361]
HOM M #4 Tooth [MA:0000348]
HOM F #3 Kidney [MA:0000368]
HOM F #2 Kidney [MA:0000368]
HOM M #1 Skeletal muscle [MA:0003148]
HOM F #2 Trachea [MA:0000441]
HOM M #1 Skin [MA:0000151]
HOM M #4 Pancreas [MA:0000120]
HOM M #1 Esophagus [MA:0000352]
HOM M #1 Bone marrow [MA:0000134]
HOM M #4 Tibia [MA:0001361]
HOM F #2 Lymph node [MA:0000139]
HOM M #4 Liver [MA:0000358]
HOM M #1 Brain [MA:0000168]
HOM M #1 Heart [MA:0000072]
HOM M #1 Ear [MA:0000236]
HOM F #3 Salivary gland [MA:0000346]
HOM F #3 Tooth [MA:0000348]
HOM F #2 Nasal cavity [MA:0000284]
HOM F #2 Gall bladder [MA:0000356]
HOM M #1 Prostate gland [MA:0000404]
HOM F #2 Thyroid
HOM M #4 Brown adipose tissue [MA:0000057]
HOM F #3 Trigeminal V ganglion [MA:0001080]
HOM F #3 Knee joint [MA:0000471]
HOM F #2 Knee joint [MA:0000471]
HOM M #1 Trachea [MA:0000441]
HOM F #2 Skeletal muscle [MA:0003148]
HOM M #1 Stomach [MA:0000353]
HOM M #1 Lymph node [MA:0000139]
HOM F #2 Salivary gland [MA:0000346]
HOM F #3 Gall bladder [MA:0000356]
HOM F #3 Thyroid
HOM F #2 Bone marrow [MA:0000134]
HOM M #4 Trigeminal V ganglion [MA:0001080]
HOM F #2 Skin [MA:0000151]
HOM F #2 Tooth [MA:0000348]
HOM F #3 Bone [MA:0001459]
HOM M #1 Tongue [MA:0000347]
HOM F #3 Mammary gland [MA:0000145]
HOM F #3 Thymus [MA:0000142]
HOM F #2 Eye [MA:0000261]
HOM F #2 Uterus [MA:0000389]
HOM F #3 Brown adipose tissue [MA:0000057]
HOM M #1 Nasal cavity [MA:0000284]
HOM F #3 Sciatic nerve [MA:0001172]
HOM F #3 Pancreas [MA:0000120]
HOM F #3 Eye [MA:0000261]
HOM F #2 Bone [MA:0001459]
HOM M #1 Adrenal gland [MA:0000116]
HOM M #1 Lung [MA:0000415]
HOM F #2 Esophagus [MA:0000352]
HOM M #1 Salivary gland [MA:0000346]
HOM M #1 Bone [MA:0001459]
HOM M #1 Seminal vesicle [MA:0000410]
HOM M #1 Urinary bladder [MA:0000380]
HOM F #2 Stomach [MA:0000353]
HOM F #2 Lung [MA:0000415]
HOM F #3 Nasal cavity [MA:0000284]
HOM M #4 Lymph node [MA:0000139]
HOM F #2 Ear [MA:0000236]
HOM F #3 Trachea [MA:0000441]
HOM F #2 Large intestine [MA:0000333]
HOM M #4 Adrenal gland [MA:0000116]
HOM M #4 Sciatic nerve [MA:0001172]
HOM M #1 Testis [MA:0000411]
HOM F #3 Ear [MA:0000236]
HOM M #4 Bone marrow [MA:0000134]
HOM M #1 Sciatic nerve [MA:0001172]
HOM M #4 Seminal vesicle [MA:0000410]
HOM M #4 Esophagus [MA:0000352]
HOM M #1 Large intestine [MA:0000333]
HOM F #3 Lung [MA:0000415]
HOM M #4 Salivary gland [MA:0000346]
HOM M #4 Small intestine [MA:0000337]
HOM F #2 Heart [MA:0000072]
HOM M #4 Bone [MA:0001459]
HOM F #3 Liver [MA:0000358]
HOM M #4 Urinary bladder [MA:0000380]
HOM F #3 Heart [MA:0000072]
HOM M #4 Prostate gland [MA:0000404]
HOM M #4 Testis [MA:0000411]
HOM F #2 Liver [MA:0000358]

Associated histopathology images

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