Ontologies in Procedure: SHIRPA HAS_CSD_002

simpleParameter: Body position HAS_CSD_001_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal locomotor activation
INCREASED 0 hypoactivity
INFERRED 1 abnormal locomotor activation
INCREASED 2 hyperactivity

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal locomotor activation

Ontology ID: MP:0003313

Sex:

INCREASED

Option: 0

Increment ID:

Ontology Term: hypoactivity

Ontology ID: MP:0001402

Sex:

INFERRED

Option: 1

Increment ID:

Ontology Term: abnormal locomotor activation

Ontology ID: MP:0003313

Sex:

INCREASED

Option: 2

Increment ID:

Ontology Term: hyperactivity

Ontology ID: MP:0001399

Sex:

simpleParameter: Tremor HAS_CSD_002_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL tremors
INFERRED 0 abnormal involuntary movement
INCREASED 1 tremors

ABNORMAL

Option:

Increment ID:

Ontology Term: tremors

Ontology ID: MP:0000745

Sex:

INFERRED

Option: 0

Increment ID:

Ontology Term: abnormal involuntary movement

Ontology ID: MP:0003492

Sex:

INCREASED

Option: 1

Increment ID:

Ontology Term: tremors

Ontology ID: MP:0000745

Sex:

simpleParameter: Defecation HAS_CSD_003_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal defecation
INFERRED 0 increased defecation amount
INFERRED 1 abnormal defecation

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal defecation

Ontology ID: MP:0003866

Sex:

INFERRED

Option: 0

Increment ID:

Ontology Term: increased defecation amount

Ontology ID: MP:0003867

Sex:

INFERRED

Option: 1

Increment ID:

Ontology Term: abnormal defecation

Ontology ID: MP:0003866

Sex:

simpleParameter: Urination HAS_CSD_004_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal urination
INFERRED 0 abnormal urination
INFERRED 1 oliguria

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal urination

Ontology ID: MP:0001756

Sex:

INFERRED

Option: 0

Increment ID:

Ontology Term: abnormal urination

Ontology ID: MP:0001756

Sex:

INFERRED

Option: 1

Increment ID:

Ontology Term: oliguria

Ontology ID: MP:0003620

Sex:

simpleParameter: Palpebral closure HAS_CSD_005_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL eyelids fail to open
INFERRED 0 abnormal timing of postnatal eyelid opening
INCREASED 1 eyelids fail to open

ABNORMAL

Option:

Increment ID:

Ontology Term: eyelids fail to open

Ontology ID: MP:0005176

Sex:

INFERRED

Option: 0

Increment ID:

Ontology Term: abnormal timing of postnatal eyelid opening

Ontology ID: MP:0004874

Sex:

INCREASED

Option: 1

Increment ID:

Ontology Term: eyelids fail to open

Ontology ID: MP:0005176

Sex:

simpleParameter: Lacrimation HAS_CSD_006_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL excessive tearing
INFERRED 1 excessive tearing

ABNORMAL

Option:

Increment ID:

Ontology Term: excessive tearing

Ontology ID: MP:0001349

Sex:

INFERRED

Option: 1

Increment ID:

Ontology Term: excessive tearing

Ontology ID: MP:0001349

Sex:

simpleParameter: Transfer arousal HAS_CSD_007_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal response to new environment
INFERRED 0 decreased exploration in new environment
INFERRED 1 novel environmental response-related retropulsion
INFERRED 2 increased exploration in new environment

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal response to new environment

Ontology ID: MP:0001413

Sex:

INFERRED

Option: 0

Increment ID:

Ontology Term: decreased exploration in new environment

Ontology ID: MP:0001417

Sex:

INFERRED

Option: 1

Increment ID:

Ontology Term: novel environmental response-related retropulsion

Ontology ID: MP:0005357

Sex:

INFERRED

Option: 2

Increment ID:

Ontology Term: increased exploration in new environment

Ontology ID: MP:0001415

Sex:

simpleParameter: Locomotor activity HAS_CSD_008_001

Option Increment Ontology Term Ontology ID Sex
DECREASED hypoactivity
INCREASED hyperactivity
INFERRED hyperactivity

DECREASED

Option:

Increment ID:

Ontology Term: hypoactivity

Ontology ID: MP:0001402

Sex:

INCREASED

Option:

Increment ID:

Ontology Term: hyperactivity

Ontology ID: MP:0001399

Sex:

INFERRED

Option:

Increment ID:

Ontology Term: hyperactivity

Ontology ID: MP:0001399

Sex:

simpleParameter: Gait HAS_CSD_009_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal gait
INFERRED 0 abnormal locomotor coordination
INCREASED 1 abnormal gait

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal gait

Ontology ID: MP:0001406

Sex:

INFERRED

Option: 0

Increment ID:

Ontology Term: abnormal locomotor coordination

Ontology ID: MP:0003312

Sex:

INCREASED

Option: 1

Increment ID:

Ontology Term: abnormal gait

Ontology ID: MP:0001406

Sex:

simpleParameter: Pelvic elevation HAS_CSD_011_001

There are no Basic Ontology Annotation associations for this Parameter

simpleParameter: Tail elevation HAS_CSD_012_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal tail movements
INCREASED 0 tail dragging
INFERRED 1 abnormal tail movements
INCREASED 2 straub tail

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal tail movements

Ontology ID: MP:0001391

Sex:

INCREASED

Option: 0

Increment ID:

Ontology Term: tail dragging

Ontology ID: MP:0005507

Sex:

INFERRED

Option: 1

Increment ID:

Ontology Term: abnormal tail movements

Ontology ID: MP:0001391

Sex:

INCREASED

Option: 2

Increment ID:

Ontology Term: straub tail

Ontology ID: MP:0003382

Sex:

simpleParameter: Startle response HAS_CSD_013_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal startle reflex
INCREASED 0 absent startle reflex
INFERRED 1 abnormal pinna reflex
INFERRED 2 increased startle reflex

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal startle reflex

Ontology ID: MP:0001486

Sex:

INCREASED

Option: 0

Increment ID:

Ontology Term: absent startle reflex

Ontology ID: MP:0006359

Sex:

INFERRED

Option: 1

Increment ID:

Ontology Term: abnormal pinna reflex

Ontology ID: MP:0001485

Sex:

INFERRED

Option: 2

Increment ID:

Ontology Term: increased startle reflex

Ontology ID: MP:0001488

Sex:

simpleParameter: Touch escape HAS_CSD_014_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal response to tactile stimuli
INCREASED 0 unresponsive to tactile stimuli
INFERRED 1 abnormal response to tactile stimuli

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal response to tactile stimuli

Ontology ID: MP:0005316

Sex:

INCREASED

Option: 0

Increment ID:

Ontology Term: unresponsive to tactile stimuli

Ontology ID: MP:0001491

Sex:

INFERRED

Option: 1

Increment ID:

Ontology Term: abnormal response to tactile stimuli

Ontology ID: MP:0005316

Sex:

simpleParameter: Positional passivity HAS_CSD_015_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal locomotor activation
DECREASED hypoactivity
INCREASED induced hyperactivity

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal locomotor activation

Ontology ID: MP:0003313

Sex:

DECREASED

Option:

Increment ID:

Ontology Term: hypoactivity

Ontology ID: MP:0001402

Sex:

INCREASED

Option:

Increment ID:

Ontology Term: induced hyperactivity

Ontology ID: MP:0008911

Sex:

simpleParameter: Trunk curl HAS_CSD_016_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL trunk curl
INFERRED 0 abnormal posture
INCREASED 1 trunk curl

ABNORMAL

Option:

Increment ID:

Ontology Term: trunk curl

Ontology ID: MP:0001512

Sex:

INFERRED

Option: 0

Increment ID:

Ontology Term: abnormal posture

Ontology ID: MP:0001504

Sex:

INCREASED

Option: 1

Increment ID:

Ontology Term: trunk curl

Ontology ID: MP:0001512

Sex:

simpleParameter: Limb grasping HAS_CSD_017_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL limb grasping
INFERRED 0 abnormal reflex
INCREASED 1 limb grasping

ABNORMAL

Option:

Increment ID:

Ontology Term: limb grasping

Ontology ID: MP:0001513

Sex:

INFERRED

Option: 0

Increment ID:

Ontology Term: abnormal reflex

Ontology ID: MP:0001961

Sex:

INCREASED

Option: 1

Increment ID:

Ontology Term: limb grasping

Ontology ID: MP:0001513

Sex:

simpleParameter: Pinna reflex HAS_CSD_018_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL absent pinna reflex
INFERRED 0 abnormal pinna reflex
INCREASED 1 absent pinna reflex

ABNORMAL

Option:

Increment ID:

Ontology Term: absent pinna reflex

Ontology ID: MP:0006358

Sex:

INFERRED

Option: 0

Increment ID:

Ontology Term: abnormal pinna reflex

Ontology ID: MP:0001485

Sex:

INCREASED

Option: 1

Increment ID:

Ontology Term: absent pinna reflex

Ontology ID: MP:0006358

Sex:

simpleParameter: Corneal reflex HAS_CSD_019_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal eye physiology
INFERRED 0 increased blinking frequency
INFERRED 1 decreased blinking frequency

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal eye physiology

Ontology ID: MP:0005253

Sex:

INFERRED

Option: 0

Increment ID:

Ontology Term: increased blinking frequency

Ontology ID: MP:0001994

Sex:

INFERRED

Option: 1

Increment ID:

Ontology Term: decreased blinking frequency

Ontology ID: MP:0001995

Sex:

simpleParameter: Contact righting reflex HAS_CSD_020_001

Option Increment Ontology Term Ontology ID Sex
INFERRED 0 altered righting response
INFERRED 1 impaired righting response

INFERRED

Option: 0

Increment ID:

Ontology Term: altered righting response

Ontology ID: MP:0002862

Sex:

INFERRED

Option: 1

Increment ID:

Ontology Term: impaired righting response

Ontology ID: MP:0001523

Sex:

simpleParameter: Evidence of biting HAS_CSD_021_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal aggression-related behavior

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal aggression-related behavior

Ontology ID: MP:0002061

Sex:

simpleParameter: Vocalisation HAS_CSD_022_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal vocalization
INFERRED 0 abnormal vocalization
INFERRED 1 abnormal vocalization

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal vocalization

Ontology ID: MP:0001529

Sex:

INFERRED

Option: 0

Increment ID:

Ontology Term: abnormal vocalization

Ontology ID: MP:0001529

Sex:

INFERRED

Option: 1

Increment ID:

Ontology Term: abnormal vocalization

Ontology ID: MP:0001529

Sex:

simpleParameter: General comments about the mouse HAS_CSD_023_001

There are no Basic Ontology Annotation associations for this Parameter

procedureMetadata: Number of animals per cage HAS_CSD_024_001

There are no Basic Ontology Annotation associations for this Parameter

procedureMetadata: Location of test HAS_CSD_025_001

There are no Basic Ontology Annotation associations for this Parameter

procedureMetadata: Number of days since animals were cleaned HAS_CSD_026_001

There are no Basic Ontology Annotation associations for this Parameter

procedureMetadata: Date of procedure HAS_CSD_027_001

There are no Basic Ontology Annotation associations for this Parameter

simpleParameter: Coat Appearance HAS_CSD_010_001

There are no Basic Ontology Annotation associations for this Parameter

simpleParameter: Grip Strength HAS_CSD_028_001

Option Increment Ontology Term Ontology ID Sex
INCREASED increased grip strength
DECREASED decreased grip strength

INCREASED

Option:

Increment ID:

Ontology Term: increased grip strength

Ontology ID: MP:0010052

Sex:

DECREASED

Option:

Increment ID:

Ontology Term: decreased grip strength

Ontology ID: MP:0010053

Sex:

simpleParameter: Body Tone HAS_CSD_029_001

There are no Basic Ontology Annotation associations for this Parameter

simpleParameter: Limb Tone HAS_CSD_030_001

There are no Basic Ontology Annotation associations for this Parameter

simpleParameter: Wire Manoeuvre HAS_CSD_031_001

There are no Basic Ontology Annotation associations for this Parameter

simpleParameter: Catelepsy HAS_CSD_032_001

There are no Basic Ontology Annotation associations for this Parameter

simpleParameter: Activity HAS_CSD_033_001

There are no Basic Ontology Annotation associations for this Parameter