Ontologies in Procedure: X-ray HAS_XRY_002

simpleParameter: Skull shape HAS_XRY_001_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal abnormal cranium morphology

ABNORMAL

Option: abnormal

Increment ID:

Ontology Term: abnormal cranium morphology

Ontology ID: MP:0000438

Sex:

simpleParameter: Zygomatic bone HAS_XRY_002_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal abnormal zygomatic bone morphology

ABNORMAL

Option: abnormal

Increment ID:

Ontology Term: abnormal zygomatic bone morphology

Ontology ID: MP:0005270

Sex:

simpleParameter: Maxilla HAS_XRY_003_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal abnormal maxilla morphology

ABNORMAL

Option: abnormal

Increment ID:

Ontology Term: abnormal maxilla morphology

Ontology ID: MP:0000455

Sex:

simpleParameter: Mandibles HAS_XRY_004_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal abnormal mandible morphology

ABNORMAL

Option: abnormal

Increment ID:

Ontology Term: abnormal mandible morphology

Ontology ID: MP:0000458

Sex:

simpleParameter: Teeth HAS_XRY_005_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal abnormal tooth morphology

ABNORMAL

Option: abnormal

Increment ID:

Ontology Term: abnormal tooth morphology

Ontology ID: MP:0002100

Sex:

simpleParameter: Scapulae HAS_XRY_006_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal abnormal scapula morphology

ABNORMAL

Option: abnormal

Increment ID:

Ontology Term: abnormal scapula morphology

Ontology ID: MP:0000149

Sex:

simpleParameter: Clavicle HAS_XRY_007_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal abnormal clavicle morphology

ABNORMAL

Option: abnormal

Increment ID:

Ontology Term: abnormal clavicle morphology

Ontology ID: MP:0005298

Sex:

simpleParameter: Number of ribs right HAS_XRY_008_001

Option Increment Ontology Term Ontology ID Sex
INCREASED increased rib number
DECREASED decreased rib number

INCREASED

Option:

Increment ID:

Ontology Term: increased rib number

Ontology ID: MP:0000480

Sex:

DECREASED

Option:

Increment ID:

Ontology Term: decreased rib number

Ontology ID: MP:0003345

Sex:

simpleParameter: Number of ribs left HAS_XRY_009_001

Option Increment Ontology Term Ontology ID Sex
INCREASED increased rib number
DECREASED decreased rib number

INCREASED

Option:

Increment ID:

Ontology Term: increased rib number

Ontology ID: MP:0000480

Sex:

DECREASED

Option:

Increment ID:

Ontology Term: decreased rib number

Ontology ID: MP:0003345

Sex:

simpleParameter: Shape of ribs HAS_XRY_010_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal abnormal rib morphology

ABNORMAL

Option: abnormal

Increment ID:

Ontology Term: abnormal rib morphology

Ontology ID: MP:0000150

Sex:

simpleParameter: Fusion of ribs HAS_XRY_011_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL fused rib fusion

ABNORMAL

Option: fused

Increment ID:

Ontology Term: rib fusion

Ontology ID: MP:0000154

Sex:

simpleParameter: Pelvis HAS_XRY_012_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal abnormal pelvic girdle bone morphology

ABNORMAL

Option: abnormal

Increment ID:

Ontology Term: abnormal pelvic girdle bone morphology

Ontology ID: MP:0004509

Sex:

simpleParameter: Number of cervical vertebrae HAS_XRY_013_001

Option Increment Ontology Term Ontology ID Sex
INCREASED increased cervical vertebrae number
DECREASED decreased cervical vertebrae number

INCREASED

Option:

Increment ID:

Ontology Term: increased cervical vertebrae number

Ontology ID: MP:0010100

Sex:

DECREASED

Option:

Increment ID:

Ontology Term: decreased cervical vertebrae number

Ontology ID: MP:0004646

Sex:

simpleParameter: Number of thoracic vertebrae HAS_XRY_014_001

Option Increment Ontology Term Ontology ID Sex
INCREASED increased thoracic vertebrae number
DECREASED decreased thoracic vertebrae number

INCREASED

Option:

Increment ID:

Ontology Term: increased thoracic vertebrae number

Ontology ID: MP:0004651

Sex:

DECREASED

Option:

Increment ID:

Ontology Term: decreased thoracic vertebrae number

Ontology ID: MP:0004648

Sex:

simpleParameter: Number of lumbar vertebrae HAS_XRY_015_001

Option Increment Ontology Term Ontology ID Sex
INCREASED increased lumbar vertebrae number
DECREASED decreased lumbar vertebrae number

INCREASED

Option:

Increment ID:

Ontology Term: increased lumbar vertebrae number

Ontology ID: MP:0004650

Sex:

DECREASED

Option:

Increment ID:

Ontology Term: decreased lumbar vertebrae number

Ontology ID: MP:0004647

Sex:

simpleParameter: Number of pelvic vertebrae HAS_XRY_016_001

Option Increment Ontology Term Ontology ID Sex
INCREASED increased sacral vertebrae number
DECREASED decreased sacral vertebrae number

INCREASED

Option:

Increment ID:

Ontology Term: increased sacral vertebrae number

Ontology ID: MP:0010101

Sex:

DECREASED

Option:

Increment ID:

Ontology Term: decreased sacral vertebrae number

Ontology ID: MP:0004649

Sex:

simpleParameter: Number of caudal vertebrae HAS_XRY_017_001

Option Increment Ontology Term Ontology ID Sex
INCREASED increased caudal vertebrae number
DECREASED decreased caudal vertebrae number

INCREASED

Option:

Increment ID:

Ontology Term: increased caudal vertebrae number

Ontology ID: MP:0010102

Sex:

DECREASED

Option:

Increment ID:

Ontology Term: decreased caudal vertebrae number

Ontology ID: MP:0001539

Sex:

simpleParameter: Shape of vertebrae HAS_XRY_018_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal abnormal vertebrae morphology

ABNORMAL

Option: abnormal

Increment ID:

Ontology Term: abnormal vertebrae morphology

Ontology ID: MP:0000137

Sex:

simpleParameter: Fusion of vertebrae HAS_XRY_019_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL yes vertebral fusion

ABNORMAL

Option: yes

Increment ID:

Ontology Term: vertebral fusion

Ontology ID: MP:0004609

Sex:

simpleParameter: Processes on vertebrae HAS_XRY_020_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal abnormal vertebral arch morphology

ABNORMAL

Option: abnormal

Increment ID:

Ontology Term: abnormal vertebral arch morphology

Ontology ID: MP:0004599

Sex:

simpleParameter: Humerus HAS_XRY_021_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal abnormal humerus morphology

ABNORMAL

Option: abnormal

Increment ID:

Ontology Term: abnormal humerus morphology

Ontology ID: MP:0005296

Sex:

simpleParameter: Radius HAS_XRY_022_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal abnormal radius morphology

ABNORMAL

Option: abnormal

Increment ID:

Ontology Term: abnormal radius morphology

Ontology ID: MP:0000552

Sex:

simpleParameter: Ulna HAS_XRY_023_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal abnormal ulna morphology

ABNORMAL

Option: abnormal

Increment ID:

Ontology Term: abnormal ulna morphology

Ontology ID: MP:0005108

Sex:

simpleParameter: Femur HAS_XRY_024_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal abnormal femur morphology

ABNORMAL

Option: abnormal

Increment ID:

Ontology Term: abnormal femur morphology

Ontology ID: MP:0000559

Sex:

simpleParameter: Tibia HAS_XRY_025_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal abnormal tibia morphology

ABNORMAL

Option: abnormal

Increment ID:

Ontology Term: abnormal tibia morphology

Ontology ID: MP:0000558

Sex:

simpleParameter: Fibula HAS_XRY_026_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal abnormal fibula morphology

ABNORMAL

Option: abnormal

Increment ID:

Ontology Term: abnormal fibula morphology

Ontology ID: MP:0002187

Sex:

simpleParameter: Joints HAS_XRY_027_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal abnormal joint morphology

ABNORMAL

Option: abnormal

Increment ID:

Ontology Term: abnormal joint morphology

Ontology ID: MP:0002932

Sex:

simpleParameter: Number of digits HAS_XRY_028_001

Option Increment Ontology Term Ontology ID Sex
INCREASED polydactyly
DECREASED oligodactyly

INCREASED

Option:

Increment ID:

Ontology Term: polydactyly

Ontology ID: MP:0000562

Sex:

DECREASED

Option:

Increment ID:

Ontology Term: oligodactyly

Ontology ID: MP:0000565

Sex:

simpleParameter: Syndactylism HAS_XRY_029_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL Syndactylism syndactyly

ABNORMAL

Option: Syndactylism

Increment ID:

Ontology Term: syndactyly

Ontology ID: MP:0000564

Sex:

simpleParameter: Completeness of digits HAS_XRY_030_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL yes brachydactyly

ABNORMAL

Option: yes

Increment ID:

Ontology Term: brachydactyly

Ontology ID: MP:0002544

Sex:

simpleParameter: Digit integrity HAS_XRY_031_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL no abnormal digit morphology

ABNORMAL

Option: no

Increment ID:

Ontology Term: abnormal digit morphology

Ontology ID: MP:0002110

Sex:

simpleParameter: Comment on XRay image HAS_XRY_032_001

There are no Basic Ontology Annotation associations for this Parameter

simpleParameter: Tibia length HAS_XRY_033_001

Option Increment Ontology Term Ontology ID Sex
INCREASED long tibia
DECREASED short tibia

INCREASED

Option:

Increment ID:

Ontology Term: long tibia

Ontology ID: MP:0004357

Sex:

DECREASED

Option:

Increment ID:

Ontology Term: short tibia

Ontology ID: MP:0002764

Sex:

seriesMediaParameter: XRay Images Lateral Orientation HAS_XRY_034_001

There are no Basic Ontology Annotation associations for this Parameter

seriesMediaParameter: XRay Images Dorso Ventral HAS_XRY_035_001

There are no Basic Ontology Annotation associations for this Parameter

simpleParameter: Alive HAS_XRY_036_001

There are no Basic Ontology Annotation associations for this Parameter

procedureMetadata: Xray equipment ID HAS_XRY_037_001

There are no Basic Ontology Annotation associations for this Parameter

procedureMetadata: Xray equipment manufacturer HAS_XRY_038_001

There are no Basic Ontology Annotation associations for this Parameter

procedureMetadata: Xray equipment model HAS_XRY_039_001

There are no Basic Ontology Annotation associations for this Parameter

procedureMetadata: Settings time of exposure HAS_XRY_040_001

There are no Basic Ontology Annotation associations for this Parameter

procedureMetadata: Settings level HAS_XRY_041_001

There are no Basic Ontology Annotation associations for this Parameter

procedureMetadata: Experimenter ID (analysis) HAS_XRY_043_001

There are no Basic Ontology Annotation associations for this Parameter

procedureMetadata: Voltage settings HAS_XRY_044_001

There are no Basic Ontology Annotation associations for this Parameter

procedureMetadata: Scanner equipment ID HAS_XRY_045_001

There are no Basic Ontology Annotation associations for this Parameter

procedureMetadata: Scanner equipment manufacturer HAS_XRY_046_001

There are no Basic Ontology Annotation associations for this Parameter

procedureMetadata: Scanner equipment model HAS_XRY_047_001

There are no Basic Ontology Annotation associations for this Parameter

procedureMetadata: Date Xray equipment last calibrated HAS_XRY_048_001

There are no Basic Ontology Annotation associations for this Parameter

seriesMediaParameter: XRay Images Forepaw HAS_XRY_049_001

There are no Basic Ontology Annotation associations for this Parameter

seriesMediaParameter: XRay Images Skull Lateral Orientation HAS_XRY_050_001

There are no Basic Ontology Annotation associations for this Parameter

seriesMediaParameter: XRay Images Skull Dorso Ventral Orientation HAS_XRY_051_001

There are no Basic Ontology Annotation associations for this Parameter

seriesMediaParameter: XRay Images Hind Leg and Hip HAS_XRY_052_001

There are no Basic Ontology Annotation associations for this Parameter

procedureMetadata: Date Scanner equipment last calibrated HAS_XRY_053_001

There are no Basic Ontology Annotation associations for this Parameter

simpleParameter: Skull size HAS_XRY_055_001

There are no Basic Ontology Annotation associations for this Parameter

simpleParameter: Ectopic calcification HAS_XRY_056_001

There are no Basic Ontology Annotation associations for this Parameter

simpleParameter: Elbow HAS_XRY_057_001

There are no Basic Ontology Annotation associations for this Parameter

simpleParameter: Rib cage HAS_XRY_058_001

There are no Basic Ontology Annotation associations for this Parameter

simpleParameter: Spine - lumbar HAS_XRY_059_001

There are no Basic Ontology Annotation associations for this Parameter

simpleParameter: Spine - tail HAS_XRY_060_001

There are no Basic Ontology Annotation associations for this Parameter

simpleParameter: Hip joint HAS_XRY_061_001

There are no Basic Ontology Annotation associations for this Parameter

simpleParameter: Knee joint HAS_XRY_062_001

There are no Basic Ontology Annotation associations for this Parameter

simpleParameter: Patella ligament oscification HAS_XRY_063_001

There are no Basic Ontology Annotation associations for this Parameter

simpleParameter: Achilles tendon oscification HAS_XRY_064_001

There are no Basic Ontology Annotation associations for this Parameter

simpleParameter: General comments about the mouse HAS_XRY_065_001

There are no Basic Ontology Annotation associations for this Parameter

procedureMetadata: PIL number HAS_XRY_066_001

There are no Basic Ontology Annotation associations for this Parameter

procedureMetadata: Date of procedure HAS_XRY_042_001

There are no Basic Ontology Annotation associations for this Parameter

procedureMetadata: Date of analysis HAS_XRY_067_001

There are no Basic Ontology Annotation associations for this Parameter

simpleParameter: Procedural comments HAS_XRY_054_001

There are no Basic Ontology Annotation associations for this Parameter

procedureMetadata: Anaesthetic reversal HAS_XRY_068_001

There are no Basic Ontology Annotation associations for this Parameter

procedureMetadata: Anesthetic agent 1 HAS_XRY_069_001

There are no Basic Ontology Annotation associations for this Parameter

procedureMetadata: Anesthetic agent 2 HAS_XRY_070_001

There are no Basic Ontology Annotation associations for this Parameter

procedureMetadata: Anesthetic agent 1 dosage HAS_XRY_071_001

There are no Basic Ontology Annotation associations for this Parameter

procedureMetadata: Anesthetic agent 2 dosage HAS_XRY_072_001

There are no Basic Ontology Annotation associations for this Parameter